The Putumayo genocide refers to the mass enslavement, torture, and killing of Indigenous peoples—including the Huitoto, Bora, Andoque, Ocaina, Nonuya, Muinane, and Resígaro nations—in the Putumayo region of the Amazon during the rubber boom that began in 1879. The exploitation intensified as South American entrepreneurs pushed into uncolonised Amazon territory in search of rubber, following earlier expeditions such as Rafael Reyes's 1874 search for cinchona (quinine bark). Reyes's own memoir documented pre-existing human trafficking of Indigenous captives along the Putumayo River, describing conditions comparable to the African slave trade.
Colombian rubber patrons, including Crisóstomo Hernández and Benjamin Larrañaga, established the first rubber stations and workforce systems in the region from the mid-1880s, using warfare, debt bondage, and violence against local tribes, including a documented 1897-era massacre of the Uruhuai Huitoto people ordered by Hernández. Julio César Arana entered the Putumayo rubber trade from Iquitos in 1896 and progressively bought out or forced out Colombian competitors, including the Larrañaga and Calderón family enterprises, consolidating control through debt, imprisonment, and alleged poisoning (Benjamin Larrañaga died in 1903, reportedly from arsenic poisoning). Arana's companies—first J.C. Arana y Hermanos, then from 1907 the London-listed Peruvian Amazon Company—expanded operations along the Igara Paraná, Cara Paraná, and Cahuinari river tributaries.
Under company administrators including Armando Normand, Andrés O'Donnell, and members of the Rodríguez family, the workforce was subjected to flogging, starvation, mutilation, immolation, and execution for failing to meet rubber quotas. The company also trained Indigenous men, called "muchachos de confianza," as enforcers and executioners against their own communities. Slave raids known as "correrias" were used to capture or kill natives and replenish the workforce; these raids are documented as continuing at least through 1910. Company employees profited from commissions tied to rubber output, which investigators including Roger Casement identified as a central driver of the violence.
Documented incidents include the September 1903 flogging, shooting, and burning of an estimated 25 to 40 Ocaina people at La Chorrera -- which eyewitnesses and participants later told the 1911 judicial commission was instigated by Rafael Larrañaga and his father, Benjamin Larrañaga, together with company employees -- and a reported 1906 order by manager Victor Macedo to kill mutilated Indigenous people at La Chorrera. Eyewitness accounts compiled by journalist Benjamin Saldaña Rocca, explorer Walter Ernest Hardenburg, and British diplomat Roger Casement brought the atrocities to international attention, leading to 215 arrest warrants issued in June 1911 against Peruvian Amazon Company employees for "a multiplicity of murders and tortures." Despite this, the company continued operating, and between 1924 and 1930 at least 6,719 Indigenous people were forcibly relocated from their traditional territory by the enterprise's successors, with roughly half dying from disease and related causes. An estimated 90 percent of the targeted Amazonian Indigenous populations were destroyed.